Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 AC099398.1-201ENST00000567919 2776 ntBASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 AC246785.2-201ENST00000432512 513 ntBASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 AL353801.3-201ENST00000609898 542 ntBASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LDLRAP1Q5SW96 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.77■□□□□ 0.43
LDLRAP1Q5SW96 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 TPSP2-201ENST00000561760 610 ntBASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 MIR3180-1-201ENST00000580374 94 ntBASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 MIR3180-3-201ENST00000584616 94 ntBASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 AC092329.2-201ENST00000598402 547 ntBASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDLRAP1Q5SW96 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 Z69720.1-201ENST00000601483 472 ntBASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 AC092119.3-201ENST00000612618 583 ntBASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.75■□□□□ 0.43
LDLRAP1Q5SW96 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms