Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 AC011676.5-201ENST00000624864 2660 ntBASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 AC009949.1-201ENST00000623048 1830 ntBASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 TSPY7P-201ENST00000431358 1114 ntBASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 AC009947.2-201ENST00000444014 672 ntBASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 EGLN1P1-201ENST00000531623 762 ntBASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RUNDC3AQ59EK9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 PVRIG2P-201ENST00000435460 978 ntBASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 MIR4785-201ENST00000585005 73 ntBASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms