Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.31■■□□□ 1
PDS5AQ29RF7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PDS5AQ29RF7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PDS5AQ29RF7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
PDS5AQ29RF7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.31■■□□□ 1
PDS5AQ29RF7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.31■■□□□ 1
PDS5AQ29RF7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 AC098831.1-202ENST00000438821 336 ntBASIC21.31■■□□□ 1
PDS5AQ29RF7 RPL13AP23-201ENST00000480739 586 ntBASIC21.31■■□□□ 1
PDS5AQ29RF7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 AC006557.2-201ENST00000592985 1240 ntBASIC21.31■■□□□ 1
PDS5AQ29RF7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
PDS5AQ29RF7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.31■■□□□ 1
PDS5AQ29RF7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.31■■□□□ 1
PDS5AQ29RF7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.31■■□□□ 1
PDS5AQ29RF7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.31■■□□□ 1
PDS5AQ29RF7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.31■■□□□ 1
PDS5AQ29RF7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDS5AQ29RF7 AC148477.5-201ENST00000625164 1645 ntBASIC21.31■■□□□ 1
PDS5AQ29RF7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.31■■□□□ 1
PDS5AQ29RF7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PDS5AQ29RF7 AC073621.1-201ENST00000392730 636 ntBASIC21.3■■□□□ 1
PDS5AQ29RF7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.3■■□□□ 1
PDS5AQ29RF7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PDS5AQ29RF7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.3■■□□□ 1
PDS5AQ29RF7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.3■■□□□ 1
PDS5AQ29RF7 KRT18P58-201ENST00000527480 1120 ntBASIC21.3■■□□□ 1
PDS5AQ29RF7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.3■■□□□ 1
PDS5AQ29RF7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.3■■□□□ 1
PDS5AQ29RF7 AC109462.3-201ENST00000573934 613 ntBASIC21.3■■□□□ 1
PDS5AQ29RF7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.3■■□□□ 1
PDS5AQ29RF7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 AC138028.4-201ENST00000564984 1845 ntBASIC21.3■■□□□ 1
PDS5AQ29RF7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.3■■□□□ 1
PDS5AQ29RF7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.3■■□□□ 1
PDS5AQ29RF7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.3■■□□□ 1
PDS5AQ29RF7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PDS5AQ29RF7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PDS5AQ29RF7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.3■■□□□ 1
PDS5AQ29RF7 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.29■■□□□ 1
PDS5AQ29RF7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.29■■□□□ 1
PDS5AQ29RF7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.29■■□□□ 1
PDS5AQ29RF7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.29■■□□□ 1
PDS5AQ29RF7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.29■■□□□ 1
PDS5AQ29RF7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.29■■□□□ 1
PDS5AQ29RF7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDS5AQ29RF7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.29■■□□□ 1
PDS5AQ29RF7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PDS5AQ29RF7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
PDS5AQ29RF7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PDS5AQ29RF7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDS5AQ29RF7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PDS5AQ29RF7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.29■■□□□ 1
PDS5AQ29RF7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDS5AQ29RF7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDS5AQ29RF7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDS5AQ29RF7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.29■■□□□ 1
PDS5AQ29RF7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDS5AQ29RF7 ABALON-201ENST00000629058 1903 ntBASIC21.29■■□□□ 1
PDS5AQ29RF7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PDS5AQ29RF7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PDS5AQ29RF7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
PDS5AQ29RF7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDS5AQ29RF7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.29■■□□□ 1
PDS5AQ29RF7 MYCLP1-201ENST00000372451 1075 ntBASIC21.29■■□□□ 1
PDS5AQ29RF7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.29■■□□□ 1
PDS5AQ29RF7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.29■■□□□ 1
PDS5AQ29RF7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.29■■□□□ 1
PDS5AQ29RF7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.29■■□□□ 1
PDS5AQ29RF7 AC023511.2-201ENST00000618803 211 ntBASIC21.29■■□□□ 1
PDS5AQ29RF7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.28■■□□□ 1
PDS5AQ29RF7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDS5AQ29RF7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PDS5AQ29RF7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDS5AQ29RF7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PDS5AQ29RF7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
PDS5AQ29RF7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PDS5AQ29RF7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms