Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 CLEC4GP1-201ENST00000596555 870 ntBASIC19.54■□□□□ 0.72
CDR1P51861 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.54■□□□□ 0.72
CDR1P51861 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDR1P51861 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDR1P51861 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CDR1P51861 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.54■□□□□ 0.72
CDR1P51861 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.54■□□□□ 0.72
CDR1P51861 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CDR1P51861 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CDR1P51861 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.53■□□□□ 0.72
CDR1P51861 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.53■□□□□ 0.72
CDR1P51861 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.53■□□□□ 0.72
CDR1P51861 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDR1P51861 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 PRORSD1P-202ENST00000563365 2154 ntBASIC19.53■□□□□ 0.72
CDR1P51861 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDR1P51861 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.53■□□□□ 0.72
CDR1P51861 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.53■□□□□ 0.72
CDR1P51861 DUSP5P1-201ENST00000441325 1139 ntBASIC19.53■□□□□ 0.72
CDR1P51861 AP002383.4-201ENST00000442518 975 ntBASIC19.53■□□□□ 0.72
CDR1P51861 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.53■□□□□ 0.72
CDR1P51861 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.53■□□□□ 0.72
CDR1P51861 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.53■□□□□ 0.72
CDR1P51861 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.53■□□□□ 0.72
CDR1P51861 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 NPAP1P7-201ENST00000613027 823 ntBASIC19.53■□□□□ 0.72
CDR1P51861 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.53■□□□□ 0.72
CDR1P51861 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CDR1P51861 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
CDR1P51861 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CDR1P51861 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDR1P51861 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.53■□□□□ 0.72
CDR1P51861 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.53■□□□□ 0.72
CDR1P51861 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 ANO7L1-203ENST00000602586 1720 ntBASIC19.53■□□□□ 0.72
CDR1P51861 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDR1P51861 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CDR1P51861 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDR1P51861 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.53■□□□□ 0.72
CDR1P51861 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.52■□□□□ 0.72
CDR1P51861 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CDR1P51861 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 AL163051.1-201ENST00000569214 1512 ntBASIC19.52■□□□□ 0.72
CDR1P51861 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.52■□□□□ 0.72
CDR1P51861 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.52■□□□□ 0.72
CDR1P51861 MIR662-201ENST00000384847 95 ntBASIC19.52■□□□□ 0.72
CDR1P51861 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.52■□□□□ 0.72
CDR1P51861 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.52■□□□□ 0.72
CDR1P51861 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.52■□□□□ 0.72
CDR1P51861 TSSC2-201ENST00000450217 709 ntBASIC19.52■□□□□ 0.72
CDR1P51861 BX276092.5-203ENST00000456199 560 ntBASIC19.52■□□□□ 0.72
CDR1P51861 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.52■□□□□ 0.72
CDR1P51861 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CDR1P51861 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.52■□□□□ 0.72
CDR1P51861 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
CDR1P51861 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CDR1P51861 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDR1P51861 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.52■□□□□ 0.71
CDR1P51861 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.52■□□□□ 0.71
CDR1P51861 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.51■□□□□ 0.71
CDR1P51861 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CDR1P51861 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms