Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB5CP51148 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB5CP51148 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 LSM12P1-201ENST00000411836 588 ntBASIC14.38□□□□□ -0.11
RAB5CP51148 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
RAB5CP51148 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB5CP51148 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB5CP51148 OR10C1-204ENST00000622521 1039 ntBASIC14.38□□□□□ -0.11
RAB5CP51148 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB5CP51148 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB5CP51148 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 AC022188.1-201ENST00000620960 1664 ntBASIC14.38□□□□□ -0.11
RAB5CP51148 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.38□□□□□ -0.11
RAB5CP51148 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB5CP51148 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB5CP51148 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5CP51148 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB5CP51148 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB5CP51148 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 AC023824.1-201ENST00000562945 2975 ntBASIC14.37□□□□□ -0.11
RAB5CP51148 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 HLA-J-201ENST00000462773 1622 ntBASIC14.37□□□□□ -0.11
RAB5CP51148 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
RAB5CP51148 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RAB5CP51148 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5CP51148 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAB5CP51148 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5CP51148 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB5CP51148 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB5CP51148 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB5CP51148 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5CP51148 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB5CP51148 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 CYP2T1P-201ENST00000432607 1285 ntBASIC14.37□□□□□ -0.11
RAB5CP51148 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5CP51148 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5CP51148 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB5CP51148 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5CP51148 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB5CP51148 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB5CP51148 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RAB5CP51148 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5CP51148 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB5CP51148 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB5CP51148 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 RCC2P3-201ENST00000418112 1537 ntBASIC14.36□□□□□ -0.11
RAB5CP51148 KRT8P41-201ENST00000533985 1514 ntBASIC14.36□□□□□ -0.11
RAB5CP51148 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.36□□□□□ -0.11
RAB5CP51148 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB5CP51148 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB5CP51148 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 CNN2P6-201ENST00000439038 900 ntBASIC14.36□□□□□ -0.11
RAB5CP51148 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.36□□□□□ -0.11
RAB5CP51148 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB5CP51148 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB5CP51148 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5CP51148 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms