Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GRIA1P42261 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GRIA1P42261 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
GRIA1P42261 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.09■□□□□ 0.49
GRIA1P42261 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.09■□□□□ 0.49
GRIA1P42261 IGHGP-201ENST00000390555 1178 ntBASIC18.09■□□□□ 0.49
GRIA1P42261 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
GRIA1P42261 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GRIA1P42261 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.09■□□□□ 0.49
GRIA1P42261 AC112907.2-201ENST00000448639 330 ntBASIC18.09■□□□□ 0.49
GRIA1P42261 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.09■□□□□ 0.49
GRIA1P42261 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
GRIA1P42261 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.09■□□□□ 0.49
GRIA1P42261 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.09■□□□□ 0.49
GRIA1P42261 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.09■□□□□ 0.49
GRIA1P42261 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.09■□□□□ 0.49
GRIA1P42261 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.09■□□□□ 0.49
GRIA1P42261 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.09■□□□□ 0.49
GRIA1P42261 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.09■□□□□ 0.49
GRIA1P42261 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
GRIA1P42261 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 AC020916.1-201ENST00000587762 1774 ntBASIC18.09■□□□□ 0.49
GRIA1P42261 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GRIA1P42261 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
GRIA1P42261 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GRIA1P42261 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GRIA1P42261 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.08■□□□□ 0.49
GRIA1P42261 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GRIA1P42261 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.49
GRIA1P42261 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GRIA1P42261 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
GRIA1P42261 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
GRIA1P42261 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
GRIA1P42261 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.08■□□□□ 0.48
GRIA1P42261 SPDYE13P-201ENST00000445314 798 ntBASIC18.08■□□□□ 0.48
GRIA1P42261 AP003733.1-201ENST00000491725 852 ntBASIC18.08■□□□□ 0.48
GRIA1P42261 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 LINC01023-201ENST00000606054 436 ntBASIC18.08■□□□□ 0.48
GRIA1P42261 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.08■□□□□ 0.48
GRIA1P42261 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 CROCCP2-202ENST00000412962 2773 ntBASIC18.08■□□□□ 0.48
GRIA1P42261 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.08■□□□□ 0.48
GRIA1P42261 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 PCDHA12-202ENST00000613593 2588 ntBASIC18.08■□□□□ 0.48
GRIA1P42261 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GRIA1P42261 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
GRIA1P42261 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
GRIA1P42261 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.07■□□□□ 0.48
GRIA1P42261 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.07■□□□□ 0.48
GRIA1P42261 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.07■□□□□ 0.48
GRIA1P42261 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
GRIA1P42261 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
GRIA1P42261 FAM8A6P-201ENST00000407496 1135 ntBASIC18.07■□□□□ 0.48
GRIA1P42261 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.07■□□□□ 0.48
GRIA1P42261 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.07■□□□□ 0.48
GRIA1P42261 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 RNF126P1-202ENST00000569893 925 ntBASIC18.07■□□□□ 0.48
GRIA1P42261 AC009154.2-201ENST00000621177 724 ntBASIC18.07■□□□□ 0.48
GRIA1P42261 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
GRIA1P42261 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
GRIA1P42261 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GRIA1P42261 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms