Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.5■■□□□ 1.19
COL15A1P39059 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.5■■□□□ 1.19
COL15A1P39059 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
COL15A1P39059 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.5■■□□□ 1.19
COL15A1P39059 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.5■■□□□ 1.19
COL15A1P39059 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL15A1P39059 AL020989.1-201ENST00000422979 469 ntBASIC22.5■■□□□ 1.19
COL15A1P39059 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.5■■□□□ 1.19
COL15A1P39059 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC22.5■■□□□ 1.19
COL15A1P39059 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.5■■□□□ 1.19
COL15A1P39059 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.5■■□□□ 1.19
COL15A1P39059 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.49■■□□□ 1.19
COL15A1P39059 SIRPAP1-201ENST00000448467 1770 ntBASIC22.49■■□□□ 1.19
COL15A1P39059 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.49■■□□□ 1.19
COL15A1P39059 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
COL15A1P39059 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL15A1P39059 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.49■■□□□ 1.19
COL15A1P39059 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL15A1P39059 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL15A1P39059 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL15A1P39059 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL15A1P39059 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL15A1P39059 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL15A1P39059 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL15A1P39059 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.49■■□□□ 1.19
COL15A1P39059 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL15A1P39059 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
COL15A1P39059 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.49■■□□□ 1.19
COL15A1P39059 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.49■■□□□ 1.19
COL15A1P39059 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.49■■□□□ 1.19
COL15A1P39059 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
COL15A1P39059 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
COL15A1P39059 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.48■■□□□ 1.19
COL15A1P39059 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
COL15A1P39059 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.48■■□□□ 1.19
COL15A1P39059 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.48■■□□□ 1.19
COL15A1P39059 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.48■■□□□ 1.19
COL15A1P39059 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.48■■□□□ 1.19
COL15A1P39059 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
COL15A1P39059 METTL21AP1-201ENST00000438852 635 ntBASIC22.48■■□□□ 1.19
COL15A1P39059 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.48■■□□□ 1.19
COL15A1P39059 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
COL15A1P39059 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22.48■■□□□ 1.19
COL15A1P39059 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC22.48■■□□□ 1.19
COL15A1P39059 MIR4751-201ENST00000578027 74 ntBASIC22.48■■□□□ 1.19
COL15A1P39059 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.48■■□□□ 1.19
COL15A1P39059 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.48■■□□□ 1.19
COL15A1P39059 AL596442.2-201ENST00000610240 980 ntBASIC22.48■■□□□ 1.19
COL15A1P39059 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.48■■□□□ 1.19
COL15A1P39059 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL15A1P39059 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC22.47■■□□□ 1.19
COL15A1P39059 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
COL15A1P39059 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 AC132938.5-201ENST00000624980 1813 ntBASIC22.47■■□□□ 1.19
COL15A1P39059 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.47■■□□□ 1.19
COL15A1P39059 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 AC090164.3-201ENST00000610780 2143 ntBASIC22.47■■□□□ 1.19
COL15A1P39059 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 COX5BP2-201ENST00000392354 334 ntBASIC22.47■■□□□ 1.19
COL15A1P39059 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC22.47■■□□□ 1.19
COL15A1P39059 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.47■■□□□ 1.19
COL15A1P39059 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
COL15A1P39059 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.47■■□□□ 1.19
COL15A1P39059 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.47■■□□□ 1.19
COL15A1P39059 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.47■■□□□ 1.19
COL15A1P39059 AC092865.6-201ENST00000642101 219 ntBASIC22.47■■□□□ 1.19
COL15A1P39059 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 NCF1C-201ENST00000438382 1427 ntBASIC22.47■■□□□ 1.19
COL15A1P39059 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
COL15A1P39059 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.47■■□□□ 1.19
COL15A1P39059 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms