Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CNGA1P29973 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNGA1P29973 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.27■□□□□ 0.83
CNGA1P29973 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNGA1P29973 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNGA1P29973 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.26■□□□□ 0.83
CNGA1P29973 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.26■□□□□ 0.83
CNGA1P29973 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 AC126763.1-201ENST00000552015 2118 ntBASIC20.26■□□□□ 0.83
CNGA1P29973 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.26■□□□□ 0.83
CNGA1P29973 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.26■□□□□ 0.83
CNGA1P29973 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 KRT18P65-201ENST00000439811 1286 ntBASIC20.26■□□□□ 0.83
CNGA1P29973 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.26■□□□□ 0.83
CNGA1P29973 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CNGA1P29973 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CNGA1P29973 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CNGA1P29973 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNGA1P29973 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.26■□□□□ 0.83
CNGA1P29973 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.26■□□□□ 0.83
CNGA1P29973 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.25■□□□□ 0.83
CNGA1P29973 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.25■□□□□ 0.83
CNGA1P29973 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.25■□□□□ 0.83
CNGA1P29973 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.25■□□□□ 0.83
CNGA1P29973 LINC01126-201ENST00000623515 1646 ntBASIC20.25■□□□□ 0.83
CNGA1P29973 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CNGA1P29973 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.25■□□□□ 0.83
CNGA1P29973 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.25■□□□□ 0.83
CNGA1P29973 AC002347.1-201ENST00000569543 541 ntBASIC20.25■□□□□ 0.83
CNGA1P29973 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.25■□□□□ 0.83
CNGA1P29973 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNGA1P29973 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 AC005082.1-201ENST00000413042 2259 ntBASIC20.24■□□□□ 0.83
CNGA1P29973 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNGA1P29973 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNGA1P29973 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNGA1P29973 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CNGA1P29973 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNGA1P29973 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNGA1P29973 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.24■□□□□ 0.83
CNGA1P29973 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.24■□□□□ 0.83
CNGA1P29973 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 AC112698.1-201ENST00000510299 916 ntBASIC20.24■□□□□ 0.83
CNGA1P29973 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNGA1P29973 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.24■□□□□ 0.83
CNGA1P29973 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.24■□□□□ 0.83
CNGA1P29973 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.24■□□□□ 0.83
CNGA1P29973 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.24■□□□□ 0.83
CNGA1P29973 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNGA1P29973 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CNGA1P29973 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.24■□□□□ 0.83
CNGA1P29973 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNGA1P29973 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNGA1P29973 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CNGA1P29973 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNGA1P29973 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.23■□□□□ 0.83
CNGA1P29973 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNGA1P29973 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNGA1P29973 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.23■□□□□ 0.83
CNGA1P29973 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.23■□□□□ 0.83
CNGA1P29973 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNGA1P29973 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.23■□□□□ 0.83
CNGA1P29973 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms