Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARSP26640 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.58■□□□□ 0.4
VARSP26640 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.58■□□□□ 0.4
VARSP26640 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARSP26640 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.58■□□□□ 0.4
VARSP26640 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
VARSP26640 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VARSP26640 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARSP26640 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VARSP26640 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARSP26640 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.58■□□□□ 0.4
VARSP26640 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARSP26640 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VARSP26640 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARSP26640 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARSP26640 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.58■□□□□ 0.4
VARSP26640 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
VARSP26640 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.58■□□□□ 0.4
VARSP26640 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VARSP26640 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VARSP26640 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.57■□□□□ 0.4
VARSP26640 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VARSP26640 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VARSP26640 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
VARSP26640 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VARSP26640 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.57■□□□□ 0.4
VARSP26640 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.57■□□□□ 0.4
VARSP26640 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.57■□□□□ 0.4
VARSP26640 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.57■□□□□ 0.4
VARSP26640 AC034232.1-201ENST00000506026 1064 ntBASIC17.57■□□□□ 0.4
VARSP26640 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 AC069148.1-201ENST00000608741 768 ntBASIC17.57■□□□□ 0.4
VARSP26640 AC079602.3-201ENST00000623931 403 ntBASIC17.57■□□□□ 0.4
VARSP26640 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.57■□□□□ 0.4
VARSP26640 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.57■□□□□ 0.4
VARSP26640 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.57■□□□□ 0.4
VARSP26640 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARSP26640 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VARSP26640 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
VARSP26640 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VARSP26640 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.56■□□□□ 0.4
VARSP26640 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.56■□□□□ 0.4
VARSP26640 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.56■□□□□ 0.4
VARSP26640 PVRIG2P-201ENST00000435460 978 ntBASIC17.56■□□□□ 0.4
VARSP26640 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.56■□□□□ 0.4
VARSP26640 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.56■□□□□ 0.4
VARSP26640 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.56■□□□□ 0.4
VARSP26640 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.56■□□□□ 0.4
VARSP26640 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.56■□□□□ 0.4
VARSP26640 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.56■□□□□ 0.4
VARSP26640 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
VARSP26640 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VARSP26640 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.56■□□□□ 0.4
VARSP26640 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.56■□□□□ 0.4
VARSP26640 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.56■□□□□ 0.4
VARSP26640 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.56■□□□□ 0.4
VARSP26640 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARSP26640 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.55■□□□□ 0.4
VARSP26640 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.55■□□□□ 0.4
VARSP26640 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
VARSP26640 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms