Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.16□□□□□ -0.14
PF4V1P10720 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PF4V1P10720 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.16□□□□□ -0.14
PF4V1P10720 TSPY12P-201ENST00000421279 868 ntBASIC14.16□□□□□ -0.14
PF4V1P10720 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 AC113404.2-201ENST00000507884 177 ntBASIC14.16□□□□□ -0.14
PF4V1P10720 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.16□□□□□ -0.14
PF4V1P10720 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.16□□□□□ -0.14
PF4V1P10720 AC124864.1-201ENST00000623408 392 ntBASIC14.16□□□□□ -0.14
PF4V1P10720 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.16□□□□□ -0.14
PF4V1P10720 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
PF4V1P10720 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.16□□□□□ -0.14
PF4V1P10720 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.16□□□□□ -0.14
PF4V1P10720 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PF4V1P10720 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
PF4V1P10720 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PF4V1P10720 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
PF4V1P10720 AC135776.1-201ENST00000319817 2481 ntBASIC14.15□□□□□ -0.14
PF4V1P10720 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.15□□□□□ -0.14
PF4V1P10720 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PF4V1P10720 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PF4V1P10720 PHGDH-209ENST00000641074 1780 ntBASIC14.15□□□□□ -0.14
PF4V1P10720 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 AC246785.2-201ENST00000432512 513 ntBASIC14.15□□□□□ -0.14
PF4V1P10720 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.15□□□□□ -0.14
PF4V1P10720 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.15□□□□□ -0.14
PF4V1P10720 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.15□□□□□ -0.14
PF4V1P10720 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.15□□□□□ -0.14
PF4V1P10720 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.15□□□□□ -0.14
PF4V1P10720 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.15□□□□□ -0.14
PF4V1P10720 AL592071.1-201ENST00000611956 408 ntBASIC14.15□□□□□ -0.14
PF4V1P10720 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
PF4V1P10720 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PF4V1P10720 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PF4V1P10720 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.15□□□□□ -0.14
PF4V1P10720 KRT8P10-201ENST00000450021 1447 ntBASIC14.15□□□□□ -0.14
PF4V1P10720 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PF4V1P10720 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.15□□□□□ -0.15
PF4V1P10720 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
PF4V1P10720 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.15□□□□□ -0.15
PF4V1P10720 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PF4V1P10720 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.14□□□□□ -0.15
PF4V1P10720 TSPY19P-201ENST00000418461 509 ntBASIC14.14□□□□□ -0.15
PF4V1P10720 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.14□□□□□ -0.15
PF4V1P10720 TSPY18P-201ENST00000441642 509 ntBASIC14.14□□□□□ -0.15
PF4V1P10720 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 MINOS1P3-201ENST00000457048 203 ntBASIC14.14□□□□□ -0.15
PF4V1P10720 KRT18P31-201ENST00000506277 1292 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms