Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 AC148477.8-201ENST00000624298 468 ntBASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB40ALP0C0E4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 FAM220CP-201ENST00000395253 831 ntBASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 WIZP1-201ENST00000531444 2299 ntBASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40ALP0C0E4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms