Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
COL1A1P02452 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A1P02452 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.37■■□□□ 1.01
COL1A1P02452 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A1P02452 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
COL1A1P02452 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.37■■□□□ 1.01
COL1A1P02452 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A1P02452 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A1P02452 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
COL1A1P02452 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A1P02452 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.37■■□□□ 1.01
COL1A1P02452 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
COL1A1P02452 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.37■■□□□ 1.01
COL1A1P02452 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A1P02452 AC002347.1-201ENST00000569543 541 ntBASIC21.37■■□□□ 1.01
COL1A1P02452 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.37■■□□□ 1.01
COL1A1P02452 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A1P02452 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A1P02452 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
COL1A1P02452 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COL1A1P02452 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A1P02452 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A1P02452 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A1P02452 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A1P02452 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.36■■□□□ 1.01
COL1A1P02452 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A1P02452 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.36■■□□□ 1.01
COL1A1P02452 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.36■■□□□ 1.01
COL1A1P02452 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A1P02452 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.36■■□□□ 1.01
COL1A1P02452 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A1P02452 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A1P02452 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.35■■□□□ 1.01
COL1A1P02452 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A1P02452 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A1P02452 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
COL1A1P02452 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A1P02452 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A1P02452 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
COL1A1P02452 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A1P02452 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A1P02452 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A1P02452 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
COL1A1P02452 AC103564.2-201ENST00000432853 1299 ntBASIC21.35■■□□□ 1.01
COL1A1P02452 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.35■■□□□ 1.01
COL1A1P02452 UNC93B6-202ENST00000528242 690 ntBASIC21.35■■□□□ 1.01
COL1A1P02452 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.35■■□□□ 1.01
COL1A1P02452 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.35■■□□□ 1.01
COL1A1P02452 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.35■■□□□ 1.01
COL1A1P02452 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
COL1A1P02452 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A1P02452 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
COL1A1P02452 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.35■■□□□ 1.01
COL1A1P02452 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
COL1A1P02452 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL1A1P02452 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.35■■□□□ 1.01
COL1A1P02452 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A1P02452 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.34■■□□□ 1.01
COL1A1P02452 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A1P02452 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
COL1A1P02452 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
COL1A1P02452 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A1P02452 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A1P02452 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A1P02452 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
COL1A1P02452 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.34■■□□□ 1.01
COL1A1P02452 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.34■■□□□ 1.01
COL1A1P02452 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.34■■□□□ 1.01
COL1A1P02452 AC109462.3-201ENST00000573934 613 ntBASIC21.34■■□□□ 1.01
COL1A1P02452 MIR3687-2-201ENST00000577708 61 ntBASIC21.34■■□□□ 1.01
COL1A1P02452 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.34■■□□□ 1.01
COL1A1P02452 MIR3687-1-201ENST00000614492 61 ntBASIC21.34■■□□□ 1.01
COL1A1P02452 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.34■■□□□ 1.01
COL1A1P02452 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A1P02452 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A1P02452 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A1P02452 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A1P02452 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
COL1A1P02452 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A1P02452 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.34■■□□□ 1.01
COL1A1P02452 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.34■■□□□ 1.01
COL1A1P02452 FLJ13224-201ENST00000313737 1514 ntBASIC21.33■■□□□ 1.01
COL1A1P02452 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A1P02452 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.33■■□□□ 1.01
COL1A1P02452 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A1P02452 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms