Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD4P01730 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD4P01730 AC010460.3-201ENST00000511359 1579 ntBASIC19.65■□□□□ 0.74
CD4P01730 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.65■□□□□ 0.74
CD4P01730 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CD4P01730 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD4P01730 AC132938.6-201ENST00000623828 1655 ntBASIC19.65■□□□□ 0.74
CD4P01730 AC073592.3-201ENST00000625118 1834 ntBASIC19.65■□□□□ 0.74
CD4P01730 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CD4P01730 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CD4P01730 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.64■□□□□ 0.74
CD4P01730 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CD4P01730 AC126763.1-201ENST00000552015 2118 ntBASIC19.64■□□□□ 0.74
CD4P01730 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CD4P01730 AC098818.2-201ENST00000564925 2320 ntBASIC19.64■□□□□ 0.74
CD4P01730 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CD4P01730 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CD4P01730 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 SPDYE21P-201ENST00000413323 827 ntBASIC19.64■□□□□ 0.73
CD4P01730 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.64■□□□□ 0.73
CD4P01730 METTL21AP1-201ENST00000438852 635 ntBASIC19.64■□□□□ 0.73
CD4P01730 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CD4P01730 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CD4P01730 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.64■□□□□ 0.73
CD4P01730 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.64■□□□□ 0.73
CD4P01730 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.64■□□□□ 0.73
CD4P01730 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CD4P01730 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD4P01730 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD4P01730 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD4P01730 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD4P01730 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CD4P01730 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD4P01730 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.63■□□□□ 0.73
CD4P01730 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD4P01730 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.63■□□□□ 0.73
CD4P01730 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CD4P01730 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.63■□□□□ 0.73
CD4P01730 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.63■□□□□ 0.73
CD4P01730 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD4P01730 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CD4P01730 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CD4P01730 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.63■□□□□ 0.73
CD4P01730 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.63■□□□□ 0.73
CD4P01730 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CD4P01730 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CD4P01730 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.63■□□□□ 0.73
CD4P01730 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD4P01730 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CD4P01730 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD4P01730 AC005082.1-201ENST00000413042 2259 ntBASIC19.63■□□□□ 0.73
CD4P01730 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CD4P01730 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CD4P01730 TNXA-203ENST00000507684 2038 ntBASIC19.63■□□□□ 0.73
CD4P01730 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD4P01730 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD4P01730 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CD4P01730 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD4P01730 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD4P01730 GMCL1P1-201ENST00000463439 1581 ntBASIC19.62■□□□□ 0.73
CD4P01730 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.62■□□□□ 0.73
CD4P01730 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD4P01730 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CD4P01730 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.62■□□□□ 0.73
CD4P01730 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CD4P01730 AC002310.6-201ENST00000624451 1377 ntBASIC19.62■□□□□ 0.73
CD4P01730 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD4P01730 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD4P01730 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD4P01730 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD4P01730 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.62■□□□□ 0.73
CD4P01730 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.62■□□□□ 0.73
CD4P01730 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.62■□□□□ 0.73
CD4P01730 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CD4P01730 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD4P01730 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD4P01730 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD4P01730 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
CD4P01730 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.61■□□□□ 0.73
CD4P01730 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CD4P01730 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.61■□□□□ 0.73
CD4P01730 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.61■□□□□ 0.73
CD4P01730 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD4P01730 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD4P01730 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD4P01730 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD4P01730 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms