Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
IFNB1P01574 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
IFNB1P01574 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.5■□□□□ 0.55
IFNB1P01574 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.5■□□□□ 0.55
IFNB1P01574 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 ECEL1P3-201ENST00000427961 737 ntBASIC18.5■□□□□ 0.55
IFNB1P01574 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
IFNB1P01574 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.5■□□□□ 0.55
IFNB1P01574 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
IFNB1P01574 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.5■□□□□ 0.55
IFNB1P01574 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
IFNB1P01574 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
IFNB1P01574 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.5■□□□□ 0.55
IFNB1P01574 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.5■□□□□ 0.55
IFNB1P01574 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFNB1P01574 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.49■□□□□ 0.55
IFNB1P01574 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IFNB1P01574 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.49■□□□□ 0.55
IFNB1P01574 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.49■□□□□ 0.55
IFNB1P01574 AP000523.1-201ENST00000398242 1049 ntBASIC18.49■□□□□ 0.55
IFNB1P01574 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.49■□□□□ 0.55
IFNB1P01574 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.49■□□□□ 0.55
IFNB1P01574 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
IFNB1P01574 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IFNB1P01574 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.49■□□□□ 0.55
IFNB1P01574 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
IFNB1P01574 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.49■□□□□ 0.55
IFNB1P01574 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
IFNB1P01574 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
IFNB1P01574 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.49■□□□□ 0.55
IFNB1P01574 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IFNB1P01574 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNB1P01574 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IFNB1P01574 LINC00167-201ENST00000530583 1419 ntBASIC18.49■□□□□ 0.55
IFNB1P01574 AC022898.2-201ENST00000616822 1312 ntBASIC18.49■□□□□ 0.55
IFNB1P01574 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFNB1P01574 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNB1P01574 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.48■□□□□ 0.55
IFNB1P01574 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFNB1P01574 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNB1P01574 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFNB1P01574 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFNB1P01574 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.48■□□□□ 0.55
IFNB1P01574 PVRIG2P-201ENST00000435460 978 ntBASIC18.48■□□□□ 0.55
IFNB1P01574 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNB1P01574 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.48■□□□□ 0.55
IFNB1P01574 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.48■□□□□ 0.55
IFNB1P01574 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.48■□□□□ 0.55
IFNB1P01574 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.48■□□□□ 0.55
IFNB1P01574 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFNB1P01574 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNB1P01574 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
IFNB1P01574 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
IFNB1P01574 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFNB1P01574 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.47■□□□□ 0.55
IFNB1P01574 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.47■□□□□ 0.55
IFNB1P01574 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.47■□□□□ 0.55
IFNB1P01574 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFNB1P01574 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.47■□□□□ 0.55
IFNB1P01574 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFNB1P01574 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFNB1P01574 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFNB1P01574 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFNB1P01574 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFNB1P01574 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms