Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
KDM4BO94953 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.73■□□□□ 0.11
KDM4BO94953 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
KDM4BO94953 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
KDM4BO94953 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.72■□□□□ 0.11
KDM4BO94953 AC034236.2-201ENST00000606662 1610 ntBASIC15.72■□□□□ 0.11
KDM4BO94953 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.72■□□□□ 0.11
KDM4BO94953 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
KDM4BO94953 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
KDM4BO94953 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 AC068418.2-201ENST00000577309 3703 ntBASIC15.72■□□□□ 0.11
KDM4BO94953 AC006116.8-202ENST00000587620 1550 ntBASIC15.72■□□□□ 0.11
KDM4BO94953 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
KDM4BO94953 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 CRYGFP-201ENST00000418459 633 ntBASIC15.72■□□□□ 0.11
KDM4BO94953 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.72■□□□□ 0.11
KDM4BO94953 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.72■□□□□ 0.11
KDM4BO94953 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.72■□□□□ 0.11
KDM4BO94953 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.72■□□□□ 0.11
KDM4BO94953 AP005242.2-201ENST00000580065 1175 ntBASIC15.72■□□□□ 0.11
KDM4BO94953 AC026471.5-201ENST00000615068 467 ntBASIC15.72■□□□□ 0.11
KDM4BO94953 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.72■□□□□ 0.11
KDM4BO94953 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.72■□□□□ 0.11
KDM4BO94953 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.72■□□□□ 0.11
KDM4BO94953 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
KDM4BO94953 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
KDM4BO94953 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.72■□□□□ 0.11
KDM4BO94953 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDM4BO94953 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.71■□□□□ 0.11
KDM4BO94953 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
KDM4BO94953 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.71■□□□□ 0.11
KDM4BO94953 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
KDM4BO94953 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 CICP6-201ENST00000457191 2729 ntBASIC15.71■□□□□ 0.11
KDM4BO94953 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.71■□□□□ 0.11
KDM4BO94953 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KDM4BO94953 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
KDM4BO94953 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
KDM4BO94953 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.71■□□□□ 0.11
KDM4BO94953 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.71■□□□□ 0.11
KDM4BO94953 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.71■□□□□ 0.11
KDM4BO94953 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.71■□□□□ 0.11
KDM4BO94953 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.71■□□□□ 0.11
KDM4BO94953 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.71■□□□□ 0.11
KDM4BO94953 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.71■□□□□ 0.11
KDM4BO94953 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.71■□□□□ 0.11
KDM4BO94953 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
KDM4BO94953 AC022211.2-201ENST00000585075 2527 ntBASIC15.71■□□□□ 0.11
KDM4BO94953 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.71■□□□□ 0.11
KDM4BO94953 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KDM4BO94953 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDM4BO94953 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.71■□□□□ 0.1
KDM4BO94953 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KDM4BO94953 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KDM4BO94953 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KDM4BO94953 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
KDM4BO94953 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KDM4BO94953 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDM4BO94953 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KDM4BO94953 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDM4BO94953 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDM4BO94953 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KDM4BO94953 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KDM4BO94953 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDM4BO94953 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KDM4BO94953 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDM4BO94953 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms