Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CLEC4GP1-201ENST00000596555 870 ntBASIC18.1■□□□□ 0.49
PRAMEF11O60813 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF11O60813 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF11O60813 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF11O60813 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF11O60813 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF11O60813 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 BX276092.7-203ENST00000637198 1536 ntBASIC18.09■□□□□ 0.49
PRAMEF11O60813 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 AC114341.1-201ENST00000618070 349 ntBASIC18.09■□□□□ 0.49
PRAMEF11O60813 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF11O60813 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF11O60813 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF11O60813 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.08■□□□□ 0.49
PRAMEF11O60813 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.08■□□□□ 0.49
PRAMEF11O60813 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF11O60813 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF11O60813 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.08■□□□□ 0.49
PRAMEF11O60813 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF11O60813 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 FAM220CP-201ENST00000395253 831 ntBASIC18.08■□□□□ 0.48
PRAMEF11O60813 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF11O60813 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF11O60813 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 AC138894.3-201ENST00000603787 634 ntBASIC18.08■□□□□ 0.48
PRAMEF11O60813 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 AC068880.1-201ENST00000507289 2297 ntBASIC18.08■□□□□ 0.48
PRAMEF11O60813 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF11O60813 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF11O60813 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF11O60813 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF11O60813 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF11O60813 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF11O60813 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF11O60813 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF11O60813 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF11O60813 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF11O60813 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
PRAMEF11O60813 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PRAMEF11O60813 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 RCN1P2-201ENST00000398357 915 ntBASIC18.07■□□□□ 0.48
PRAMEF11O60813 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF11O60813 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.07■□□□□ 0.48
PRAMEF11O60813 AC122714.2-201ENST00000502787 707 ntBASIC18.07■□□□□ 0.48
PRAMEF11O60813 FOSL1P1-201ENST00000511041 816 ntBASIC18.07■□□□□ 0.48
PRAMEF11O60813 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.07■□□□□ 0.48
PRAMEF11O60813 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF11O60813 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PRAMEF11O60813 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms