Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LCMT2O60294 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 LINC00265-3P-201ENST00000447588 903 ntBASIC17.08■□□□□ 0.32
LCMT2O60294 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.08■□□□□ 0.32
LCMT2O60294 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.08■□□□□ 0.32
LCMT2O60294 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.08■□□□□ 0.32
LCMT2O60294 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
LCMT2O60294 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LCMT2O60294 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.07■□□□□ 0.32
LCMT2O60294 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.07■□□□□ 0.32
LCMT2O60294 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LCMT2O60294 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LCMT2O60294 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.07■□□□□ 0.32
LCMT2O60294 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.07■□□□□ 0.32
LCMT2O60294 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LCMT2O60294 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.07■□□□□ 0.32
LCMT2O60294 AC246785.2-201ENST00000432512 513 ntBASIC17.07■□□□□ 0.32
LCMT2O60294 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.07■□□□□ 0.32
LCMT2O60294 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
LCMT2O60294 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.07■□□□□ 0.32
LCMT2O60294 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.07■□□□□ 0.32
LCMT2O60294 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LCMT2O60294 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.07■□□□□ 0.32
LCMT2O60294 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LCMT2O60294 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.07■□□□□ 0.32
LCMT2O60294 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.07■□□□□ 0.32
LCMT2O60294 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LCMT2O60294 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LCMT2O60294 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCMT2O60294 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LCMT2O60294 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LCMT2O60294 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.06■□□□□ 0.32
LCMT2O60294 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 AC125634.1-201ENST00000438758 1403 ntBASIC17.06■□□□□ 0.32
LCMT2O60294 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LCMT2O60294 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LCMT2O60294 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LCMT2O60294 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 AP000867.3-201ENST00000524675 377 ntBASIC17.06■□□□□ 0.32
LCMT2O60294 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.06■□□□□ 0.32
LCMT2O60294 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.06■□□□□ 0.32
LCMT2O60294 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.06■□□□□ 0.32
LCMT2O60294 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.06■□□□□ 0.32
LCMT2O60294 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LCMT2O60294 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LCMT2O60294 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LCMT2O60294 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LCMT2O60294 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCMT2O60294 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LCMT2O60294 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.05■□□□□ 0.32
LCMT2O60294 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.05■□□□□ 0.32
LCMT2O60294 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LCMT2O60294 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LCMT2O60294 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LCMT2O60294 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.05■□□□□ 0.32
LCMT2O60294 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.05■□□□□ 0.32
LCMT2O60294 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.05■□□□□ 0.32
LCMT2O60294 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 AC097374.2-201ENST00000618617 1306 ntBASIC17.05■□□□□ 0.32
LCMT2O60294 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms