Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
KDELR3O43731 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.09■□□□□ 0.49
KDELR3O43731 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
KDELR3O43731 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
KDELR3O43731 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.09■□□□□ 0.49
KDELR3O43731 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.09■□□□□ 0.49
KDELR3O43731 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.09■□□□□ 0.49
KDELR3O43731 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.09■□□□□ 0.49
KDELR3O43731 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.09■□□□□ 0.49
KDELR3O43731 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.09■□□□□ 0.49
KDELR3O43731 KRT126P-201ENST00000549467 1181 ntBASIC18.09■□□□□ 0.49
KDELR3O43731 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.09■□□□□ 0.49
KDELR3O43731 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.09■□□□□ 0.49
KDELR3O43731 AL591684.3-201ENST00000605187 298 ntBASIC18.09■□□□□ 0.49
KDELR3O43731 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
KDELR3O43731 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.09■□□□□ 0.49
KDELR3O43731 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
KDELR3O43731 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
KDELR3O43731 AC006116.8-202ENST00000587620 1550 ntBASIC18.08■□□□□ 0.49
KDELR3O43731 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KDELR3O43731 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
KDELR3O43731 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
KDELR3O43731 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
KDELR3O43731 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
KDELR3O43731 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KDELR3O43731 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDELR3O43731 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KDELR3O43731 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.08■□□□□ 0.48
KDELR3O43731 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.08■□□□□ 0.48
KDELR3O43731 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KDELR3O43731 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDELR3O43731 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.08■□□□□ 0.48
KDELR3O43731 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.08■□□□□ 0.48
KDELR3O43731 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.08■□□□□ 0.48
KDELR3O43731 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
KDELR3O43731 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.08■□□□□ 0.48
KDELR3O43731 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDELR3O43731 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KDELR3O43731 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDELR3O43731 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.08■□□□□ 0.48
KDELR3O43731 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
KDELR3O43731 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.08■□□□□ 0.48
KDELR3O43731 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.08■□□□□ 0.48
KDELR3O43731 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.08■□□□□ 0.48
KDELR3O43731 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDELR3O43731 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.08■□□□□ 0.48
KDELR3O43731 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDELR3O43731 AC007613.1-201ENST00000572811 2597 ntBASIC18.07■□□□□ 0.48
KDELR3O43731 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.07■□□□□ 0.48
KDELR3O43731 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
KDELR3O43731 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDELR3O43731 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KDELR3O43731 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.07■□□□□ 0.48
KDELR3O43731 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.07■□□□□ 0.48
KDELR3O43731 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KDELR3O43731 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.07■□□□□ 0.48
KDELR3O43731 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.07■□□□□ 0.48
KDELR3O43731 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.07■□□□□ 0.48
KDELR3O43731 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KDELR3O43731 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
KDELR3O43731 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDELR3O43731 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDELR3O43731 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.07■□□□□ 0.48
KDELR3O43731 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KDELR3O43731 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
KDELR3O43731 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
KDELR3O43731 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
KDELR3O43731 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KDELR3O43731 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KDELR3O43731 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDELR3O43731 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDELR3O43731 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
KDELR3O43731 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KDELR3O43731 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.06■□□□□ 0.48
KDELR3O43731 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.06■□□□□ 0.48
KDELR3O43731 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
KDELR3O43731 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.06■□□□□ 0.48
KDELR3O43731 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms