Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
XRCC2O43543 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
XRCC2O43543 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
XRCC2O43543 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
XRCC2O43543 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.55■□□□□ 0.08
XRCC2O43543 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.55■□□□□ 0.08
XRCC2O43543 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 AC006116.8-202ENST00000587620 1550 ntBASIC15.55■□□□□ 0.08
XRCC2O43543 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.55■□□□□ 0.08
XRCC2O43543 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.55■□□□□ 0.08
XRCC2O43543 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.55■□□□□ 0.08
XRCC2O43543 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.55■□□□□ 0.08
XRCC2O43543 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.55■□□□□ 0.08
XRCC2O43543 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.55■□□□□ 0.08
XRCC2O43543 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.55■□□□□ 0.08
XRCC2O43543 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.55■□□□□ 0.08
XRCC2O43543 ZNF444P1-201ENST00000559497 298 ntBASIC15.55■□□□□ 0.08
XRCC2O43543 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.55■□□□□ 0.08
XRCC2O43543 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.55■□□□□ 0.08
XRCC2O43543 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.55■□□□□ 0.08
XRCC2O43543 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.55■□□□□ 0.08
XRCC2O43543 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
XRCC2O43543 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
XRCC2O43543 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.55■□□□□ 0.08
XRCC2O43543 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC2O43543 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.55■□□□□ 0.08
XRCC2O43543 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
XRCC2O43543 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.55■□□□□ 0.08
XRCC2O43543 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.54■□□□□ 0.08
XRCC2O43543 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.54■□□□□ 0.08
XRCC2O43543 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
XRCC2O43543 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.54■□□□□ 0.08
XRCC2O43543 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.54■□□□□ 0.08
XRCC2O43543 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.54■□□□□ 0.08
XRCC2O43543 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.54■□□□□ 0.08
XRCC2O43543 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.54■□□□□ 0.08
XRCC2O43543 LINC01238-205ENST00000567549 1107 ntBASIC15.54■□□□□ 0.08
XRCC2O43543 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.54■□□□□ 0.08
XRCC2O43543 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.54■□□□□ 0.08
XRCC2O43543 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
XRCC2O43543 AC006011.2-201ENST00000621313 1158 ntBASIC15.54■□□□□ 0.08
XRCC2O43543 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.54■□□□□ 0.08
XRCC2O43543 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.54■□□□□ 0.08
XRCC2O43543 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
XRCC2O43543 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC2O43543 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.53■□□□□ 0.08
XRCC2O43543 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
XRCC2O43543 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.53■□□□□ 0.08
XRCC2O43543 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.53■□□□□ 0.08
XRCC2O43543 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
XRCC2O43543 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.53■□□□□ 0.08
XRCC2O43543 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
XRCC2O43543 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
XRCC2O43543 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms