Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.02■□□□□ 0.48
SMAD6O43541 KRT18P55-202ENST00000578578 1546 ntBASIC18.02■□□□□ 0.47
SMAD6O43541 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMAD6O43541 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.02■□□□□ 0.47
SMAD6O43541 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SMAD6O43541 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.01■□□□□ 0.47
SMAD6O43541 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.01■□□□□ 0.47
SMAD6O43541 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.01■□□□□ 0.47
SMAD6O43541 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SMAD6O43541 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.01■□□□□ 0.47
SMAD6O43541 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.01■□□□□ 0.47
SMAD6O43541 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.01■□□□□ 0.47
SMAD6O43541 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.01■□□□□ 0.47
SMAD6O43541 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.01■□□□□ 0.47
SMAD6O43541 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.01■□□□□ 0.47
SMAD6O43541 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.01■□□□□ 0.47
SMAD6O43541 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.01■□□□□ 0.47
SMAD6O43541 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.01■□□□□ 0.47
SMAD6O43541 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMAD6O43541 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.01■□□□□ 0.47
SMAD6O43541 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SMAD6O43541 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
SMAD6O43541 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 COX5BP2-201ENST00000392354 334 ntBASIC18■□□□□ 0.47
SMAD6O43541 ABCD1P5-201ENST00000445663 754 ntBASIC18■□□□□ 0.47
SMAD6O43541 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18■□□□□ 0.47
SMAD6O43541 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18■□□□□ 0.47
SMAD6O43541 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 AL160237.2-201ENST00000556165 472 ntBASIC18■□□□□ 0.47
SMAD6O43541 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18■□□□□ 0.47
SMAD6O43541 TP73-AS1-207ENST00000624167 988 ntBASIC18■□□□□ 0.47
SMAD6O43541 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18■□□□□ 0.47
SMAD6O43541 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
SMAD6O43541 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 AL390961.4-201ENST00000623958 2535 ntBASIC18■□□□□ 0.47
SMAD6O43541 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMAD6O43541 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18■□□□□ 0.47
SMAD6O43541 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18■□□□□ 0.47
SMAD6O43541 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.99■□□□□ 0.47
SMAD6O43541 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 SIRPAP1-201ENST00000448467 1770 ntBASIC17.99■□□□□ 0.47
SMAD6O43541 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 KRT8P10-201ENST00000450021 1447 ntBASIC17.99■□□□□ 0.47
SMAD6O43541 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
SMAD6O43541 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SMAD6O43541 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.99■□□□□ 0.47
SMAD6O43541 FDX1P1-201ENST00000449115 551 ntBASIC17.99■□□□□ 0.47
SMAD6O43541 AC106795.1-205ENST00000512851 1056 ntBASIC17.99■□□□□ 0.47
SMAD6O43541 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 AP002469.2-201ENST00000531724 424 ntBASIC17.99■□□□□ 0.47
SMAD6O43541 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.99■□□□□ 0.47
SMAD6O43541 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.99■□□□□ 0.47
SMAD6O43541 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms