Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF9O43307 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF9O43307 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF9O43307 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF9O43307 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 FAM8A6P-201ENST00000407496 1135 ntBASIC16.59■□□□□ 0.25
ARHGEF9O43307 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 CA15P1-201ENST00000481698 905 ntBASIC16.59■□□□□ 0.25
ARHGEF9O43307 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 KRT126P-201ENST00000549467 1181 ntBASIC16.59■□□□□ 0.25
ARHGEF9O43307 AP000550.4-202ENST00000639755 178 ntBASIC16.59■□□□□ 0.25
ARHGEF9O43307 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF9O43307 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF9O43307 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF9O43307 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 AL162741.1-201ENST00000565563 1558 ntBASIC16.59■□□□□ 0.25
ARHGEF9O43307 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF9O43307 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ARHGEF9O43307 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF9O43307 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF9O43307 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF9O43307 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF9O43307 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.58■□□□□ 0.25
ARHGEF9O43307 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ARHGEF9O43307 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF9O43307 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.58■□□□□ 0.25
ARHGEF9O43307 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF9O43307 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
ARHGEF9O43307 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF9O43307 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
ARHGEF9O43307 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF9O43307 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 MIR564-202ENST00000385049 94 ntBASIC16.58■□□□□ 0.24
ARHGEF9O43307 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 TPM4P1-201ENST00000436100 807 ntBASIC16.58■□□□□ 0.24
ARHGEF9O43307 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 AL512604.3-201ENST00000569583 964 ntBASIC16.58■□□□□ 0.24
ARHGEF9O43307 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ARHGEF9O43307 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF9O43307 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ARHGEF9O43307 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.57■□□□□ 0.24
ARHGEF9O43307 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF9O43307 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF9O43307 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF9O43307 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF9O43307 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF9O43307 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF9O43307 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.57■□□□□ 0.24
ARHGEF9O43307 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF9O43307 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF9O43307 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.57■□□□□ 0.24
ARHGEF9O43307 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF9O43307 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
ARHGEF9O43307 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF9O43307 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.57■□□□□ 0.24
ARHGEF9O43307 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.57■□□□□ 0.24
ARHGEF9O43307 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF9O43307 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms