Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SMAD9O15198 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.24■□□□□ 0.19
SMAD9O15198 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD9O15198 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD9O15198 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 Z83836.1-201ENST00000624605 1642 ntBASIC16.23■□□□□ 0.19
SMAD9O15198 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
SMAD9O15198 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SMAD9O15198 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SMAD9O15198 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SMAD9O15198 GPR32P1-201ENST00000601788 811 ntBASIC16.23■□□□□ 0.19
SMAD9O15198 AL390719.2-201ENST00000606993 987 ntBASIC16.23■□□□□ 0.19
SMAD9O15198 AC091076.1-201ENST00000610741 619 ntBASIC16.23■□□□□ 0.19
SMAD9O15198 AC004263.2-201ENST00000617183 678 ntBASIC16.23■□□□□ 0.19
SMAD9O15198 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
SMAD9O15198 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SMAD9O15198 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SMAD9O15198 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD9O15198 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SMAD9O15198 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SMAD9O15198 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SMAD9O15198 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SMAD9O15198 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SMAD9O15198 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.22■□□□□ 0.19
SMAD9O15198 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.22■□□□□ 0.19
SMAD9O15198 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SMAD9O15198 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.22■□□□□ 0.19
SMAD9O15198 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD9O15198 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.22■□□□□ 0.19
SMAD9O15198 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.22■□□□□ 0.19
SMAD9O15198 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.22■□□□□ 0.19
SMAD9O15198 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.22■□□□□ 0.19
SMAD9O15198 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD9O15198 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SMAD9O15198 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SMAD9O15198 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.22■□□□□ 0.19
SMAD9O15198 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD9O15198 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.21■□□□□ 0.19
SMAD9O15198 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.21■□□□□ 0.19
SMAD9O15198 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SMAD9O15198 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SMAD9O15198 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SMAD9O15198 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.21■□□□□ 0.19
SMAD9O15198 NOC2LP1-202ENST00000452600 2235 ntBASIC16.21■□□□□ 0.19
SMAD9O15198 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SMAD9O15198 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.21■□□□□ 0.19
SMAD9O15198 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.21■□□□□ 0.19
SMAD9O15198 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.21■□□□□ 0.19
SMAD9O15198 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.21■□□□□ 0.19
SMAD9O15198 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.21■□□□□ 0.19
SMAD9O15198 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMAD9O15198 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.21■□□□□ 0.19
SMAD9O15198 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms