Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CLDN5O00501 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLDN5O00501 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 AC097374.2-201ENST00000618617 1306 ntBASIC18.82■□□□□ 0.6
CLDN5O00501 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 AC004870.1-201ENST00000315132 882 ntBASIC18.82■□□□□ 0.6
CLDN5O00501 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN5O00501 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN5O00501 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN5O00501 AC079781.3-201ENST00000449110 356 ntBASIC18.82■□□□□ 0.6
CLDN5O00501 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN5O00501 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN5O00501 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN5O00501 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN5O00501 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN5O00501 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN5O00501 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN5O00501 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLDN5O00501 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN5O00501 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN5O00501 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLDN5O00501 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN5O00501 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN5O00501 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CLDN5O00501 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN5O00501 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN5O00501 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN5O00501 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN5O00501 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN5O00501 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLDN5O00501 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN5O00501 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN5O00501 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN5O00501 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN5O00501 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
CLDN5O00501 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN5O00501 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN5O00501 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN5O00501 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN5O00501 KRT18P55-202ENST00000578578 1546 ntBASIC18.8■□□□□ 0.6
CLDN5O00501 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN5O00501 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN5O00501 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN5O00501 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN5O00501 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN5O00501 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN5O00501 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN5O00501 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN5O00501 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN5O00501 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN5O00501 AF238378.1-201ENST00000526806 358 ntBASIC18.8■□□□□ 0.6
CLDN5O00501 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.8■□□□□ 0.6
CLDN5O00501 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.8■□□□□ 0.6
CLDN5O00501 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.8■□□□□ 0.6
CLDN5O00501 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.8■□□□□ 0.6
CLDN5O00501 AL031008.1-201ENST00000619963 541 ntBASIC18.8■□□□□ 0.6
CLDN5O00501 REXO1L6P-202ENST00000619970 1078 ntBASIC18.8■□□□□ 0.6
CLDN5O00501 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN5O00501 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN5O00501 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CLDN5O00501 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLDN5O00501 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN5O00501 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN5O00501 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms