Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LINC00304-203ENST00000565008 1864 ntBASIC19.12■□□□□ 0.65
FOXN3O00409 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN3O00409 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXN3O00409 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXN3O00409 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
FOXN3O00409 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXN3O00409 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN3O00409 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXN3O00409 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN3O00409 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.11■□□□□ 0.65
FOXN3O00409 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FOXN3O00409 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXN3O00409 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN3O00409 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
FOXN3O00409 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN3O00409 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN3O00409 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN3O00409 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN3O00409 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.11■□□□□ 0.65
FOXN3O00409 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN3O00409 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
FOXN3O00409 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXN3O00409 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN3O00409 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXN3O00409 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN3O00409 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
FOXN3O00409 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXN3O00409 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
FOXN3O00409 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXN3O00409 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
FOXN3O00409 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
FOXN3O00409 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXN3O00409 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXN3O00409 DDX43P3-201ENST00000441064 443 ntBASIC19.1■□□□□ 0.65
FOXN3O00409 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.1■□□□□ 0.65
FOXN3O00409 LINC01238-205ENST00000567549 1107 ntBASIC19.1■□□□□ 0.65
FOXN3O00409 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.1■□□□□ 0.65
FOXN3O00409 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
FOXN3O00409 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
FOXN3O00409 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXN3O00409 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN3O00409 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
FOXN3O00409 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXN3O00409 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXN3O00409 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 AC108860.2-201ENST00000562760 2183 ntBASIC19.09■□□□□ 0.65
FOXN3O00409 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXN3O00409 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXN3O00409 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
FOXN3O00409 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
FOXN3O00409 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms