Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 AC009237.3-201ENST00000393279 1427 ntBASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 IDNK-201ENST00000376417 511 ntTSL 5 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 AC105020.1-201ENST00000435356 2205 ntBASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 PRAL-201ENST00000624952 3286 ntBASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 PCDHA14-201ENST00000506751 2298 ntBASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 GNE-204ENST00000539208 2190 ntTSL 2 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 FAM21FP-204ENST00000608637 956 ntBASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CHKB-CPT1BH3BT56 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms