Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.93■□□□□ 0.46
CCDC189A1A4V9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 TSPY7P-201ENST00000431358 1114 ntBASIC17.92■□□□□ 0.46
CCDC189A1A4V9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 NEK4P2-201ENST00000580004 1012 ntBASIC17.92■□□□□ 0.46
CCDC189A1A4V9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 KRT18P55-202ENST00000578578 1546 ntBASIC17.92■□□□□ 0.46
CCDC189A1A4V9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC189A1A4V9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 DUTP2-201ENST00000519164 463 ntBASIC17.91■□□□□ 0.46
CCDC189A1A4V9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC189A1A4V9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 MIR1238-201ENST00000408483 83 ntBASIC17.9■□□□□ 0.46
CCDC189A1A4V9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 AC010240.3-201ENST00000607688 395 ntBASIC17.9■□□□□ 0.46
CCDC189A1A4V9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC189A1A4V9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms