Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 HMGA1P5-201ENST00000412453 271 ntBASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 ECEL1P2-202ENST00000465689 757 ntBASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 LINC01451-201ENST00000623792 534 ntBASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 AL121761.2-201ENST00000598007 1648 ntBASIC17.98■□□□□ 0.47
TCRBV9S1A1TA0A576 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 KRT8P47-201ENST00000604727 1398 ntBASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV9S1A1TA0A576 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 AC124067.4-201ENST00000519691 2379 ntBASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 ECEL1P3-201ENST00000427961 737 ntBASIC17.96■□□□□ 0.47
TCRBV9S1A1TA0A576 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms