Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC069148.1-201ENST00000608741 768 ntBASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC009949.1-201ENST00000623048 1830 ntBASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC012317.2-201ENST00000623305 2251 ntBASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC196A0A1B0GTZ2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.77■□□□□ 0.91
CCDC196A0A1B0GTZ2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC196A0A1B0GTZ2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC196A0A1B0GTZ2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 AC096633.1-201ENST00000422446 749 ntBASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 KRT18P1-202ENST00000452408 1331 ntBASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC196A0A1B0GTZ2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 DRAXINP1-201ENST00000437611 948 ntBASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC196A0A1B0GTZ2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC196A0A1B0GTZ2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms