Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HLA-DRB4X5D2U9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DRB4X5D2U9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
HLA-DRB4X5D2U9 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.49□□□□□ -0.25
HLA-DRB4X5D2U9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DRB4X5D2U9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DRB4X5D2U9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-DRB4X5D2U9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DRB4X5D2U9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.49□□□□□ -0.25
HLA-DRB4X5D2U9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 REXO1L9P-201ENST00000604264 2108 ntBASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 RCN1P1-201ENST00000400413 996 ntBASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 LINC01238-205ENST00000567549 1107 ntBASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 RN7SL850P-201ENST00000579959 291 ntBASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DRB4X5D2U9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 TMPOP1-202ENST00000424642 1267 ntBASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 AC024563.2-201ENST00000603282 481 ntBASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 AL391807.1-203ENST00000604392 2365 ntBASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 FLJ13224-201ENST00000313737 1514 ntBASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 KRT89P-201ENST00000620027 1478 ntBASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DRB4X5D2U9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 AC138028.4-201ENST00000564984 1845 ntBASIC13.46□□□□□ -0.25
HLA-DRB4X5D2U9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms