Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 AC106886.4-201ENST00000623557 2502 ntBASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN6Q9Y6Q1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN6Q9Y6Q1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 AC009947.2-201ENST00000444014 672 ntBASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 AC010653.2-201ENST00000623505 997 ntBASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 LINC01451-201ENST00000623792 534 ntBASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 KRT8P47-201ENST00000604727 1398 ntBASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 AGGF1P2-201ENST00000426656 2106 ntBASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN6Q9Y6Q1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 TSPY7P-201ENST00000431358 1114 ntBASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms