Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.22■□□□□ 0.99
CYP46A1Q9Y6A2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CYP46A1Q9Y6A2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.22■□□□□ 0.99
CYP46A1Q9Y6A2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CYP46A1Q9Y6A2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CYP46A1Q9Y6A2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CYP46A1Q9Y6A2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 AC133963.1-201ENST00000504166 1679 ntBASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 PP12613-201ENST00000424958 2230 ntBASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 HBZP1-201ENST00000354915 429 ntBASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 MIR662-201ENST00000384847 95 ntBASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 IGHGP-201ENST00000390555 1178 ntBASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 TSPY12P-201ENST00000421279 868 ntBASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 AL359075.1-203ENST00000462729 1002 ntBASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CYP46A1Q9Y6A2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CYP46A1Q9Y6A2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 AC112907.2-201ENST00000448639 330 ntBASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 AP003733.1-201ENST00000491725 852 ntBASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 AC139713.2-201ENST00000641328 2723 ntBASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYP46A1Q9Y6A2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 HYMAI.1-201ENST00000620949 238 ntBASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CYP46A1Q9Y6A2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms