Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 TSPY22P-201ENST00000427496 604 ntBASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 AC092119.3-201ENST00000612618 583 ntBASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB6Q9Y5F9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 AP002383.4-201ENST00000442518 975 ntBASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 NUS1P1-201ENST00000446295 882 ntBASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 AC126763.1-201ENST00000552015 2118 ntBASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB6Q9Y5F9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 DRAXINP1-201ENST00000437611 948 ntBASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB6Q9Y5F9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms