Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 AP000997.3-201ENST00000623333 2250 ntBASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 AC068472.1-201ENST00000474589 881 ntBASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 AL390961.4-201ENST00000623958 2535 ntBASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 AC233702.3-201ENST00000578656 1387 ntBASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB9Q9Y5E1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDHB9Q9Y5E1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB9Q9Y5E1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB9Q9Y5E1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB9Q9Y5E1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PCDHB9Q9Y5E1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PCDHB9Q9Y5E1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB9Q9Y5E1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 AF228730.7-201ENST00000641842 219 ntBASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB9Q9Y5E1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 DUTP2-201ENST00000519164 463 ntBASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 AP001005.1-201ENST00000571755 1248 ntBASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 AC090340.1-201ENST00000620778 4980 ntBASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms