Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 AC016734.2-201ENST00000624325 1377 ntBASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 TSPY12P-201ENST00000421279 868 ntBASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 AC090616.6-201ENST00000582640 721 ntBASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 AC009154.2-201ENST00000621177 724 ntBASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPARGC1AQ9UBK2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.61■□□□□ 0.57
PPARGC1AQ9UBK2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 CHCHD2P8-201ENST00000429873 447 ntBASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 TSSC2-201ENST00000450217 709 ntBASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 RN7SL606P-201ENST00000472779 293 ntBASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PPARGC1AQ9UBK2 GUSBP12-201ENST00000513727 720 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms