Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 AC004408.2-201ENST00000623613 2777 ntBASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 FAM197Y8-203ENST00000450145 560 ntBASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 MTDHP3-201ENST00000594186 672 ntBASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 AC010460.3-201ENST00000511359 1579 ntBASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 AC090164.3-201ENST00000610780 2143 ntBASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.86■□□□□ 0.13
CLCF1Q9UBD9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 AP005117.1-201ENST00000584346 1413 ntBASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 KRT18P67-201ENST00000432816 1264 ntBASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 AC064862.7-201ENST00000604520 867 ntBASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCF1Q9UBD9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms