Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 AF186996.4-201ENST00000467186 377 ntBASIC16.38■□□□□ 0.21
LRFN1Q9P244 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 AL355877.3-201ENST00000622820 899 ntBASIC16.38■□□□□ 0.21
LRFN1Q9P244 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 AC093503.3-201ENST00000624917 2352 ntBASIC16.38■□□□□ 0.21
LRFN1Q9P244 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRFN1Q9P244 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRFN1Q9P244 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.37■□□□□ 0.21
LRFN1Q9P244 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 AP001269.4-201ENST00000609611 512 ntBASIC16.37■□□□□ 0.21
LRFN1Q9P244 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 HLA-A-201ENST00000376802 1334 ntBASIC16.37■□□□□ 0.21
LRFN1Q9P244 AC097374.2-201ENST00000618617 1306 ntBASIC16.37■□□□□ 0.21
LRFN1Q9P244 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LRFN1Q9P244 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRFN1Q9P244 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRFN1Q9P244 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRFN1Q9P244 PKD1P1-201ENST00000458669 6805 ntBASIC16.36■□□□□ 0.21
LRFN1Q9P244 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.36■□□□□ 0.21
LRFN1Q9P244 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRFN1Q9P244 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.36■□□□□ 0.21
LRFN1Q9P244 TNXA-203ENST00000507684 2038 ntBASIC16.36■□□□□ 0.21
LRFN1Q9P244 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRFN1Q9P244 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRFN1Q9P244 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
LRFN1Q9P244 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms