Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 KRT8P10-201ENST00000450021 1447 ntBASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 SLC25A6P5-201ENST00000435663 894 ntBASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.74■■□□□ 1.07
HMG20BQ9P0W2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMG20BQ9P0W2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 AP002469.2-201ENST00000531724 424 ntBASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 AC097374.2-201ENST00000618617 1306 ntBASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMG20BQ9P0W2 AC008764.6-201ENST00000595909 2069 ntBASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms