Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HACD3Q9P035 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HACD3Q9P035 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HACD3Q9P035 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HACD3Q9P035 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HACD3Q9P035 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HACD3Q9P035 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HACD3Q9P035 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HACD3Q9P035 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HACD3Q9P035 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.1■□□□□ 0.49
HACD3Q9P035 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.1■□□□□ 0.49
HACD3Q9P035 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.1■□□□□ 0.49
HACD3Q9P035 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.1■□□□□ 0.49
HACD3Q9P035 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HACD3Q9P035 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.1■□□□□ 0.49
HACD3Q9P035 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
HACD3Q9P035 PRORSD1P-202ENST00000563365 2154 ntBASIC18.1■□□□□ 0.49
HACD3Q9P035 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.1■□□□□ 0.49
HACD3Q9P035 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HACD3Q9P035 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HACD3Q9P035 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.1■□□□□ 0.49
HACD3Q9P035 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.1■□□□□ 0.49
HACD3Q9P035 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HACD3Q9P035 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.09■□□□□ 0.49
HACD3Q9P035 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.09■□□□□ 0.49
HACD3Q9P035 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.09■□□□□ 0.49
HACD3Q9P035 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HACD3Q9P035 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.09■□□□□ 0.49
HACD3Q9P035 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.09■□□□□ 0.49
HACD3Q9P035 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.09■□□□□ 0.49
HACD3Q9P035 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.09■□□□□ 0.49
HACD3Q9P035 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.09■□□□□ 0.49
HACD3Q9P035 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.09■□□□□ 0.49
HACD3Q9P035 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.09■□□□□ 0.49
HACD3Q9P035 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.09■□□□□ 0.49
HACD3Q9P035 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.09■□□□□ 0.49
HACD3Q9P035 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HACD3Q9P035 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.09■□□□□ 0.49
HACD3Q9P035 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 GNAS-203ENST00000306120 1878 ntBASIC18.09■□□□□ 0.49
HACD3Q9P035 SIRPAP1-201ENST00000448467 1770 ntBASIC18.09■□□□□ 0.49
HACD3Q9P035 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.09■□□□□ 0.49
HACD3Q9P035 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HACD3Q9P035 Z83836.1-201ENST00000624605 1642 ntBASIC18.09■□□□□ 0.49
HACD3Q9P035 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.08■□□□□ 0.49
HACD3Q9P035 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HACD3Q9P035 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
HACD3Q9P035 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HACD3Q9P035 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HACD3Q9P035 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
HACD3Q9P035 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.08■□□□□ 0.49
HACD3Q9P035 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.08■□□□□ 0.49
HACD3Q9P035 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.08■□□□□ 0.49
HACD3Q9P035 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HACD3Q9P035 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HACD3Q9P035 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.08■□□□□ 0.49
HACD3Q9P035 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HACD3Q9P035 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
HACD3Q9P035 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
HACD3Q9P035 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.08■□□□□ 0.48
HACD3Q9P035 RNF126P1-202ENST00000569893 925 ntBASIC18.08■□□□□ 0.48
HACD3Q9P035 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.08■□□□□ 0.48
HACD3Q9P035 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
HACD3Q9P035 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.08■□□□□ 0.48
HACD3Q9P035 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HACD3Q9P035 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.08■□□□□ 0.48
HACD3Q9P035 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms