Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THUMPD1Q9NXG2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.85■□□□□ 0.29
THUMPD1Q9NXG2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
THUMPD1Q9NXG2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THUMPD1Q9NXG2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 AL023806.1-201ENST00000603994 1649 ntBASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 AD000864.1-201ENST00000624076 2295 ntBASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
THUMPD1Q9NXG2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
THUMPD1Q9NXG2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
THUMPD1Q9NXG2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
THUMPD1Q9NXG2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
THUMPD1Q9NXG2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 INGX-201ENST00000359239 846 ntBASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 AC034232.1-201ENST00000506026 1064 ntBASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 AC132938.6-201ENST00000623828 1655 ntBASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THUMPD1Q9NXG2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 KRT89P-201ENST00000620027 1478 ntBASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms