Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM7Q9NR12 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 LAGE3P1-201ENST00000425356 484 ntBASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.9■□□□□ 0.78
PDLIM7Q9NR12 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
PDLIM7Q9NR12 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms