Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 AC134043.2-201ENST00000624206 2238 ntBASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 AL024508.2-201ENST00000607749 1894 ntBASIC17.16■□□□□ 0.34
NECTIN3Q9NQS3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 IER3-202ENST00000376377 1350 ntBASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN3Q9NQS3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
NECTIN3Q9NQS3 LINC01126-201ENST00000623515 1646 ntBASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 KRT18P48-201ENST00000434763 852 ntBASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 RNF126P1-202ENST00000569893 925 ntBASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 AC091076.1-201ENST00000610741 619 ntBASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NECTIN3Q9NQS3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms