Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 AC022898.2-201ENST00000616822 1312 ntBASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
NLRC4Q9NPP4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.39■□□□□ 0.7
NLRC4Q9NPP4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC4Q9NPP4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 AC034232.1-201ENST00000506026 1064 ntBASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 AC140113.3-201ENST00000605663 199 ntBASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC4Q9NPP4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 RASA4DP-201ENST00000460726 1199 ntBASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 AL441883.1-201ENST00000566170 1045 ntBASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 AC024563.2-201ENST00000603282 481 ntBASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 AC009949.1-201ENST00000623048 1830 ntBASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms