Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF304Q9HCX3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF304Q9HCX3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF304Q9HCX3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ZNF304Q9HCX3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF304Q9HCX3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ZNF304Q9HCX3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF304Q9HCX3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 UNC93B7-201ENST00000509439 705 ntBASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 RN7SL510P-201ENST00000581311 263 ntBASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 AC005336.2-201ENST00000593183 939 ntBASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
ZNF304Q9HCX3 AC022898.2-201ENST00000616822 1312 ntBASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AC090164.3-201ENST00000610780 2143 ntBASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AC004870.1-201ENST00000315132 882 ntBASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AC096582.2-201ENST00000510860 516 ntBASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AC009533.2-201ENST00000543664 586 ntBASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 BNIP3P18-201ENST00000593976 575 ntBASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AC093677.2-201ENST00000600169 1863 ntBASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AL096828.2-201ENST00000567259 1965 ntBASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF304Q9HCX3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF304Q9HCX3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.96■□□□□ 0.3
ZNF304Q9HCX3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
ZNF304Q9HCX3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF304Q9HCX3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.95■□□□□ 0.3
ZNF304Q9HCX3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms