Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.47■□□□□ 0.23
CHD8Q9HCK8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CHD8Q9HCK8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHD8Q9HCK8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.47■□□□□ 0.23
CHD8Q9HCK8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHD8Q9HCK8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CHD8Q9HCK8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 AC002056.1-201ENST00000395613 760 ntBASIC16.46■□□□□ 0.23
CHD8Q9HCK8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 AL135744.1-201ENST00000565098 629 ntBASIC16.46■□□□□ 0.23
CHD8Q9HCK8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 AC099778.1-201ENST00000568593 1911 ntBASIC16.46■□□□□ 0.23
CHD8Q9HCK8 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.46■□□□□ 0.23
CHD8Q9HCK8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 AL020989.1-201ENST00000422979 469 ntBASIC16.46■□□□□ 0.23
CHD8Q9HCK8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 AC084121.4-201ENST00000641598 221 ntBASIC16.46■□□□□ 0.23
CHD8Q9HCK8 AF228730.8-201ENST00000642140 221 ntBASIC16.46■□□□□ 0.23
CHD8Q9HCK8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CHD8Q9HCK8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CHD8Q9HCK8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.45■□□□□ 0.22
CHD8Q9HCK8 FAM86C2P-203ENST00000528684 1004 ntBASIC16.45■□□□□ 0.22
CHD8Q9HCK8 KRT17P8-201ENST00000540749 863 ntBASIC16.45■□□□□ 0.22
CHD8Q9HCK8 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.45■□□□□ 0.22
CHD8Q9HCK8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 SIRPAP1-201ENST00000448467 1770 ntBASIC16.45■□□□□ 0.22
CHD8Q9HCK8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD8Q9HCK8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD8Q9HCK8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 ACTL9-202ENST00000612068 1252 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms