Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH9Q9HC56 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH9Q9HC56 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PCDH9Q9HC56 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
PCDH9Q9HC56 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH9Q9HC56 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
PCDH9Q9HC56 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH9Q9HC56 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH9Q9HC56 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 AL136038.4-201ENST00000603606 1261 ntBASIC18.47■□□□□ 0.55
PCDH9Q9HC56 AL023806.1-201ENST00000603994 1649 ntBASIC18.47■□□□□ 0.55
PCDH9Q9HC56 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 AL391807.1-203ENST00000604392 2365 ntBASIC18.47■□□□□ 0.55
PCDH9Q9HC56 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 AL138688.1-201ENST00000624851 1594 ntBASIC18.47■□□□□ 0.55
PCDH9Q9HC56 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH9Q9HC56 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 AC092597.1-201ENST00000487352 616 ntBASIC18.46■□□□□ 0.55
PCDH9Q9HC56 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.46■□□□□ 0.55
PCDH9Q9HC56 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH9Q9HC56 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
PCDH9Q9HC56 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDH9Q9HC56 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.45■□□□□ 0.54
PCDH9Q9HC56 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDH9Q9HC56 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms