Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 AC023157.3-201ENST00000619086 2088 ntBASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 AC005562.1-201ENST00000583030 3219 ntBASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 AC010141.3-201ENST00000456659 717 ntBASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CYSTM1Q9H1C7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms