Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MYO15B-237ENST00000642007 4893 ntBASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 AL512625.2-201ENST00000417533 625 ntBASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 AC005181.1-201ENST00000604782 1256 ntBASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 AC131212.1-201ENST00000613771 668 ntBASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 AL138688.1-201ENST00000624851 1594 ntBASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms