Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 ATP5G2P1-201ENST00000433580 426 ntBASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.01□□□□□ -0.01
PCGF1Q9BSM1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 CHCHD2P8-201ENST00000429873 447 ntBASIC15□□□□□ -0.01
PCGF1Q9BSM1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 GPR32P1-201ENST00000601788 811 ntBASIC15□□□□□ -0.01
PCGF1Q9BSM1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCGF1Q9BSM1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PCGF1Q9BSM1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms