Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 MTCL1P1-201ENST00000446207 792 ntBASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 Z83836.1-201ENST00000624605 1642 ntBASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB18PQ96TA0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 TMPOP1-202ENST00000424642 1267 ntBASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 AC116407.2-201ENST00000613639 860 ntBASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB18PQ96TA0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 DDX43P3-201ENST00000441064 443 ntBASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 AL671277.2-201ENST00000458060 996 ntBASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PCDHB18PQ96TA0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 HLA-J-201ENST00000462773 1622 ntBASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms