Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 DDX43P3-201ENST00000441064 443 ntBASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 RN7SL606P-201ENST00000472779 293 ntBASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.43■□□□□ 0.54
CSPG4P5Q96PW8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 GUSBP12-201ENST00000513727 720 ntBASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 KRT8P26-201ENST00000534154 1276 ntBASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSPG4P5Q96PW8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 AL592071.1-201ENST00000611956 408 ntBASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 AC116407.4-201ENST00000623319 1061 ntBASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSPG4P5Q96PW8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms